318 lines
10 KiB
Plaintext
318 lines
10 KiB
Plaintext
//
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// Copyright (c) 2009
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// Gunter Winkler
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//
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// Distributed under the Boost Software License, Version 1.0. (See
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// accompanying file LICENSE_1_0.txt or copy at
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// http://www.boost.org/LICENSE_1_0.txt)
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//
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//
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#ifndef _BOOST_UBLAS_SPARSE_VIEW_
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#define _BOOST_UBLAS_SPARSE_VIEW_
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#include <boost/numeric/ublas/matrix_expression.hpp>
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#include <boost/numeric/ublas/detail/matrix_assign.hpp>
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#if BOOST_UBLAS_TYPE_CHECK
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#include <boost/numeric/ublas/matrix.hpp>
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#endif
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#include <boost/next_prior.hpp>
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#include <boost/type_traits/remove_cv.hpp>
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#include <boost/numeric/ublas/storage.hpp>
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namespace boost { namespace numeric { namespace ublas {
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// view a chunk of memory as ublas array
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template < class T >
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class c_array_view
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: public storage_array< c_array_view<T> > {
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private:
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typedef c_array_view<T> self_type;
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typedef T * pointer;
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public:
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// TODO: think about a const pointer
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typedef const pointer array_type;
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typedef std::size_t size_type;
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typedef std::ptrdiff_t difference_type;
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typedef T value_type;
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typedef const T &const_reference;
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typedef const T *const_pointer;
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typedef const_pointer const_iterator;
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typedef std::reverse_iterator<const_iterator> const_reverse_iterator;
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//
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// typedefs required by vector concept
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//
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typedef dense_tag storage_category;
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typedef const vector_reference<const self_type> const_closure_type;
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c_array_view(size_type size, array_type data) :
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size_(size), data_(data)
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{}
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~c_array_view()
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{}
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//
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// immutable methods of container concept
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//
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BOOST_UBLAS_INLINE
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size_type size () const {
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return size_;
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}
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BOOST_UBLAS_INLINE
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const_reference operator [] (size_type i) const {
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BOOST_UBLAS_CHECK (i < size_, bad_index ());
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return data_ [i];
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}
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BOOST_UBLAS_INLINE
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const_iterator begin () const {
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return data_;
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}
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BOOST_UBLAS_INLINE
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const_iterator end () const {
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return data_ + size_;
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}
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BOOST_UBLAS_INLINE
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const_reverse_iterator rbegin () const {
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return const_reverse_iterator (end ());
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}
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BOOST_UBLAS_INLINE
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const_reverse_iterator rend () const {
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return const_reverse_iterator (begin ());
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}
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private:
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size_type size_;
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array_type data_;
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};
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/** \brief Present existing arrays as compressed array based
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* sparse matrix.
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* This class provides CRS / CCS storage layout.
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*
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* see also http://www.netlib.org/utk/papers/templates/node90.html
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*
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* \param L layout type, either row_major or column_major
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* \param IB index base, use 0 for C indexing and 1 for
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* FORTRAN indexing of the internal index arrays. This
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* does not affect the operator()(int,int) where the first
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* row/column has always index 0.
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* \param IA index array type, e.g., int[]
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* \param TA value array type, e.g., double[]
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*/
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template<class L, std::size_t IB, class IA, class JA, class TA>
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class compressed_matrix_view:
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public matrix_expression<compressed_matrix_view<L, IB, IA, JA, TA> > {
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public:
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typedef typename vector_view_traits<TA>::value_type value_type;
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private:
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typedef value_type &true_reference;
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typedef value_type *pointer;
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typedef const value_type *const_pointer;
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typedef L layout_type;
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typedef compressed_matrix_view<L, IB, IA, JA, TA> self_type;
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public:
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#ifdef BOOST_UBLAS_ENABLE_PROXY_SHORTCUTS
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using matrix_expression<self_type>::operator ();
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#endif
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// ISSUE require type consistency check
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// is_convertable (IA::size_type, TA::size_type)
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typedef typename boost::remove_cv<typename vector_view_traits<JA>::value_type>::type index_type;
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// for compatibility, should be removed some day ...
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typedef index_type size_type;
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// size_type for the data arrays.
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typedef typename vector_view_traits<JA>::size_type array_size_type;
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typedef typename vector_view_traits<JA>::difference_type difference_type;
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typedef const value_type & const_reference;
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// do NOT define reference type, because class is read only
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// typedef value_type & reference;
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typedef IA rowptr_array_type;
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typedef JA index_array_type;
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typedef TA value_array_type;
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typedef const matrix_reference<const self_type> const_closure_type;
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typedef matrix_reference<self_type> closure_type;
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// FIXME: define a corresponding temporary type
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// typedef compressed_vector<T, IB, IA, TA> vector_temporary_type;
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// FIXME: define a corresponding temporary type
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// typedef self_type matrix_temporary_type;
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typedef sparse_tag storage_category;
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typedef typename L::orientation_category orientation_category;
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//
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// private types for internal use
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//
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private:
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typedef typename vector_view_traits<index_array_type>::const_iterator const_subiterator_type;
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//
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// Construction and destruction
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//
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private:
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/// private default constructor because data must be filled by caller
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BOOST_UBLAS_INLINE
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compressed_matrix_view () { }
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public:
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BOOST_UBLAS_INLINE
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compressed_matrix_view (index_type n_rows, index_type n_cols, array_size_type nnz
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, const rowptr_array_type & iptr
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, const index_array_type & jptr
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, const value_array_type & values):
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matrix_expression<self_type> (),
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size1_ (n_rows), size2_ (n_cols),
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nnz_ (nnz),
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index1_data_ (iptr),
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index2_data_ (jptr),
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value_data_ (values) {
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storage_invariants ();
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}
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BOOST_UBLAS_INLINE
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compressed_matrix_view(const compressed_matrix_view& o) :
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size1_(o.size1_), size2_(o.size2_),
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nnz_(o.nnz_),
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index1_data_(o.index1_data_),
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index2_data_(o.index2_data_),
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value_data_(o.value_data_)
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{}
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//
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// implement immutable iterator types
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//
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class const_iterator1 {};
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class const_iterator2 {};
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typedef reverse_iterator_base1<const_iterator1> const_reverse_iterator1;
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typedef reverse_iterator_base2<const_iterator2> const_reverse_iterator2;
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//
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// implement all read only methods for the matrix expression concept
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//
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//! return the number of rows
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index_type size1() const {
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return size1_;
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}
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//! return the number of columns
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index_type size2() const {
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return size2_;
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}
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//! return value at position (i,j)
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value_type operator()(index_type i, index_type j) const {
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const_pointer p = find_element(i,j);
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if (!p) {
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return zero_;
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} else {
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return *p;
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}
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}
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private:
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//
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// private helper functions
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//
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const_pointer find_element (index_type i, index_type j) const {
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index_type element1 (layout_type::index_M (i, j));
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index_type element2 (layout_type::index_m (i, j));
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const array_size_type itv = zero_based( index1_data_[element1] );
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const array_size_type itv_next = zero_based( index1_data_[element1+1] );
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const_subiterator_type it_start = boost::next(vector_view_traits<index_array_type>::begin(index2_data_),itv);
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const_subiterator_type it_end = boost::next(vector_view_traits<index_array_type>::begin(index2_data_),itv_next);
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const_subiterator_type it = find_index_in_row(it_start, it_end, element2) ;
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if (it == it_end || *it != k_based (element2))
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return 0;
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return &value_data_ [it - vector_view_traits<index_array_type>::begin(index2_data_)];
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}
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const_subiterator_type find_index_in_row(const_subiterator_type it_start
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, const_subiterator_type it_end
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, index_type index) const {
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return std::lower_bound( it_start
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, it_end
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, k_based (index) );
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}
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private:
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void storage_invariants () const {
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BOOST_UBLAS_CHECK (index1_data_ [layout_type::size_M (size1_, size2_)] == k_based (nnz_), external_logic ());
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}
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index_type size1_;
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index_type size2_;
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array_size_type nnz_;
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const rowptr_array_type & index1_data_;
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const index_array_type & index2_data_;
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const value_array_type & value_data_;
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static const value_type zero_;
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BOOST_UBLAS_INLINE
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static index_type zero_based (index_type k_based_index) {
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return k_based_index - IB;
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}
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BOOST_UBLAS_INLINE
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static index_type k_based (index_type zero_based_index) {
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return zero_based_index + IB;
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}
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friend class iterator1;
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friend class iterator2;
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friend class const_iterator1;
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friend class const_iterator2;
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};
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template<class L, std::size_t IB, class IA, class JA, class TA >
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const typename compressed_matrix_view<L,IB,IA,JA,TA>::value_type
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compressed_matrix_view<L,IB,IA,JA,TA>::zero_ = value_type/*zero*/();
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template<class L, std::size_t IB, class IA, class JA, class TA >
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compressed_matrix_view<L,IB,IA,JA,TA>
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make_compressed_matrix_view(typename vector_view_traits<JA>::value_type n_rows
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, typename vector_view_traits<JA>::value_type n_cols
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, typename vector_view_traits<JA>::size_type nnz
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, const IA & ia
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, const JA & ja
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, const TA & ta) {
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return compressed_matrix_view<L,IB,IA,JA,TA>(n_rows, n_cols, nnz, ia, ja, ta);
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}
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}}}
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#endif
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